Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | HRR99_14390 | Q8UBM8 | Negative | 2974856 - 2976472 | 57092.4 |
| heparinase ii/iii family protein | HRR99_14395 | A0A0H3C3S1 | Negative | 2976622 - 2978244 | 59748.8 |
| mfs transporter | HRR99_14400 | Q87KD3 | Negative | 2978580 - 2979968 | 50121.2 |
| zinc metalloprotease htpx | HRR99_14405 | Q8UBM5 | Negative | 2979959 - 2980918 | 34625.8 |
| duf1674 domain-containing protein | HRR99_14410 | Q8BTE0 | Positive | 2981026 - 2981226 | 7235.34 |
| parb/repb/spo0j family partition protein | HRR99_14415 | P0CAV8 | Negative | 2981274 - 2982158 | 32746.0 |
| para family protein | HRR99_14420 | P0CAV7 | Negative | 2982231 - 2983022 | 28438.4 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | HRR99_14425 | Q8UBM1 | Negative | 2983042 - 2983662 | 22949.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | HRR99_14430 | Q8UBM0 | Negative | 2983673 - 2985550 | 67704.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | HRR99_14435 | A9CHB2 | Negative | 2985608 - 2986933 | 47816.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

