Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | HRR99_14240 | P24404 | Positive | 2941658 - 2942770 | 39741.0 |
| cytochrome-c peroxidase | HRR99_14245 | Q51658 | Negative | 2942751 - 2943992 | 44093.9 |
| hypothetical protein | HRR99_14250 | Not Available | Negative | 2944095 - 2944475 | 14484.2 |
| glutathione-dependent disulfide-bond oxidoreductase | HRR99_14255 | Q46845 | Negative | 2944485 - 2945381 | 33236.0 |
| cobyrinate a,c-diamide synthase | HRR99_14260 | Q8UBQ8 | Negative | 2945486 - 2946799 | 46026.1 |
| cobalt-precorrin-5b (c(1))-methyltransferase | HRR99_14265 | Q8UBQ6 | Positive | 2947027 - 2948157 | 39089.8 |
| precorrin-4 c(11)-methyltransferase | HRR99_14270 | P21922 | Negative | 2948112 - 2948885 | 27369.9 |
| cobalamin biosynthesis protein | HRR99_14275 | Not Available | Negative | 2948882 - 2949277 | 13273.1 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbie | HRR99_14280 | P21921 | Negative | 2949256 - 2950512 | 44008.7 |
| cobalt-precorrin-6a reductase | HRR99_14285 | P21920 | Positive | 2950511 - 2951278 | 27341.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

