Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | HRR99_14190 | P19257 | Negative | 2929734 - 2930663 | 33707.4 |
| lyse family translocator | HRR99_14195 | P0AG36 | Negative | 2930977 - 2931624 | 23272.4 |
| sdr family nad(p)-dependent oxidoreductase | HRR99_14200 | C8WGQ3 | Negative | 2931731 - 2932585 | 30230.8 |
| argininosuccinate synthase | HRR99_14205 | Q8UC31 | Positive | 2932829 - 2934052 | 45082.1 |
| multidrug effflux mfs transporter | HRR99_14210 | P96709 | Negative | 2934100 - 2935278 | 40654.3 |
| winged helix-turn-helix transcriptional regulator | HRR99_14215 | Q2NT07 | Negative | 2935296 - 2935766 | 17102.4 |
| m3 family metallopeptidase | HRR99_14220 | P24171 | Positive | 2935947 - 2938007 | 76298.0 |
| translational gtpase typa | HRR99_14225 | P0A3B2 | Positive | 2938182 - 2940002 | 66516.3 |
| gnat family n-acetyltransferase | HRR99_14230 | O32075 | Positive | 2940239 - 2940745 | 18927.7 |
| 3-isopropylmalate dehydratase small subunit | HRR99_14235 | Q8UBR0 | Positive | 2940871 - 2941476 | 21837.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

