Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | HRR99_14140 | Q8UC03 | Negative | 2918620 - 2919522 | 32492.6 |
| is110 family transposase | HRR99_14145 | P19257 | Positive | 2921546 - 2922475 | 33707.4 |
| 50s ribosomal protein l19 | HRR99_14150 | Q8UBZ5 | Negative | 2922738 - 2923304 | 20251.0 |
| sulfite exporter taue/safe family protein | HRR99_14155 | P46490 | Positive | 2923578 - 2924324 | 25684.1 |
| trna (guanosine(37)-n1)-methyltransferase trmd | HRR99_14160 | Q8UBZ7 | Negative | 2924306 - 2925007 | 25478.6 |
| ribosome maturation factor rimm | HRR99_14165 | Q8UBZ8 | Negative | 2925009 - 2925581 | 20484.1 |
| 30s ribosomal protein s16 | HRR99_14170 | B9JUC4 | Negative | 2925700 - 2926077 | 13641.3 |
| chorismate mutase | HRR99_14175 | Q57696 | Negative | 2926111 - 2926428 | 11950.1 |
| signal recognition particle protein | HRR99_14180 | P0AGD9 | Negative | 2926436 - 2928013 | 54969.3 |
| mbl fold metallo-hydrolase | HRR99_14185 | Q965X9 | Positive | 2928349 - 2929419 | 39710.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

