Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1232 domain-containing protein | HRR99_14040 | O31670 | Negative | 2899867 - 2900244 | 13893.9 |
| 4a-hydroxytetrahydrobiopterin dehydratase | HRR99_14045 | Q8UC22 | Negative | 2900297 - 2900602 | 11237.3 |
| low molecular weight phosphotyrosine protein phosphatase | HRR99_14050 | P81693 | Positive | 2900635 - 2901141 | 18535.1 |
| rna 2',3'-cyclic phosphodiesterase | HRR99_14055 | Q9YB03 | Negative | 2901048 - 2901641 | 21928.4 |
| arylesterase | HRR99_14060 | Q07792 | Negative | 2901710 - 2902360 | 22774.7 |
| abc transporter atp-binding protein | HRR99_14065 | P0A9T9 | Positive | 2902444 - 2903154 | 24656.9 |
| abc transporter permease | HRR99_14070 | P77504 | Positive | 2903151 - 2905709 | 90345.4 |
| bax inhibitor-1/ycca family protein | HRR99_14075 | Q9ZE15 | Positive | 2905948 - 2906730 | 27954.5 |
| duf2794 domain-containing protein | HRR99_14080 | Not Available | Negative | 2906811 - 2907203 | 14938.0 |
| thioredoxin family protein | HRR99_14085 | Not Available | Negative | 2907526 - 2908278 | 26773.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

