Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase family protein | HRR99_13990 | Not Available | Positive | 2889214 - 2889762 | 20783.7 |
| 3-isopropylmalate dehydratase large subunit | HRR99_13995 | Q8UBY9 | Negative | 2889830 - 2891239 | 50593.2 |
| mfs transporter | HRR99_14000 | P0DPR4 | Positive | 2891678 - 2892970 | 46664.7 |
| amino acid abc transporter permease | HRR99_14005 | P54953 | Negative | 2893009 - 2893824 | 29879.3 |
| transporter substrate-binding domain-containing protein | HRR99_14010 | P42199 | Negative | 2893858 - 2894601 | 26656.7 |
| abc transporter atp-binding protein | HRR99_14015 | Q28VL7 | Negative | 2894781 - 2895575 | 28151.4 |
| abc transporter permease | HRR99_14020 | Q9ZDG1 | Negative | 2895572 - 2896453 | 30312.1 |
| abc transporter substrate-binding protein | HRR99_14025 | Q9ZDG2 | Negative | 2896588 - 2897541 | 32465.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | HRR99_14030 | Q7CWI1 | Negative | 2897646 - 2898839 | 44529.0 |
| hypothetical protein | HRR99_14035 | Not Available | Negative | 2899084 - 2899587 | 17916.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

