Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase ii | HRR99_13940 | P0AGG3 | Positive | 2879714 - 2880598 | 33058.5 |
| p-ii family nitrogen regulator | HRR99_13945 | O54053 | Positive | 2880811 - 2881161 | 12601.4 |
| ammonium transporter | HRR99_13950 | P69680 | Positive | 2881190 - 2882551 | 46840.9 |
| dna translocase ftsk | HRR99_13955 | Q8U526 | Positive | 2882766 - 2885393 | 95113.6 |
| outer membrane lipoprotein carrier protein lola | HRR99_13960 | Q607H7 | Positive | 2885547 - 2886227 | 25178.2 |
| exodeoxyribonuclease iii | HRR99_13965 | P09030 | Positive | 2886322 - 2887125 | 30547.7 |
| type ii toxin-antitoxin system hicb family antitoxin | HRR99_13970 | P51716 | Negative | 2887134 - 2887535 | 14308.8 |
| type ii toxin-antitoxin system hica family toxin | HRR99_13975 | Not Available | Negative | 2887541 - 2887729 | 6794.3 |
| cyclic nucleotide-binding domain-containing protein | HRR99_13980 | Q5SID7 | Negative | 2887796 - 2888251 | 16672.1 |
| response regulator transcription factor | HRR99_13985 | A0QTK2 | Negative | 2888339 - 2889022 | 25413.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

