Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | HRR99_13890 | P45493 | Negative | 2858168 - 2859346 | 42686.8 |
| protein ndvb | HRR99_13895 | P20471 | Positive | 2859911 - 2868403 | 316762.0 |
| yggs family pyridoxal phosphate-dependent enzyme | HRR99_13900 | Q9KUQ4 | Negative | 2868711 - 2869370 | 23807.7 |
| leucine--trna ligase | HRR99_13905 | Q8UBV2 | Positive | 2869565 - 2872195 | 98055.4 |
| hypothetical protein | HRR99_13910 | Not Available | Positive | 2872188 - 2872733 | 19650.3 |
| dna polymerase iii subunit delta | HRR99_13915 | Q9ZDX5 | Positive | 2872741 - 2873778 | 37853.6 |
| ferredoxin family protein | HRR99_13920 | P0CY91 | Negative | 2874016 - 2874354 | 12364.6 |
| rna-binding s4 domain-containing protein | HRR99_13925 | P0ACH0 | Negative | 2874611 - 2875021 | 15809.8 |
| helicase | HRR99_13930 | O94445 | Negative | 2875025 - 2878093 | 112318.0 |
| ubiquinone biosynthesis hydroxylase | HRR99_13935 | Q2RMZ4 | Negative | 2878413 - 2879627 | 43373.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

