Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | HRR99_13790 | Not Available | Negative | 2833103 - 2833495 | 14789.7 |
| abc-f family atp-binding cassette domain-containing protein | HRR99_13795 | Q45978 | Negative | 2833571 - 2835391 | 67413.5 |
| thiamine diphosphokinase | HRR99_13800 | Not Available | Negative | 2835396 - 2836046 | 22728.1 |
| homoserine o-succinyltransferase | HRR99_13805 | Q7CWE8 | Positive | 2836291 - 2837217 | 35812.7 |
| galactose mutarotase | HRR99_13810 | Q66HG4 | Positive | 2837288 - 2838310 | 37473.9 |
| monofunctional biosynthetic peptidoglycan transglycosylase | HRR99_13815 | Q8UBX8 | Negative | 2838314 - 2839051 | 27121.2 |
| polyprenyl synthetase family protein | HRR99_13820 | B1XJV9 | Positive | 2839219 - 2840118 | 31805.2 |
| deor/glpr transcriptional regulator | HRR99_13825 | Q92ET8 | Positive | 2840275 - 2841099 | 28869.7 |
| mfs transporter | HRR99_13830 | Q7CH99 | Positive | 2841096 - 2842280 | 41195.9 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | HRR99_13835 | P58665 | Positive | 2842436 - 2843686 | 44841.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

