Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate 5-kinase | HRR99_13690 | Q8UBS0 | Positive | 2807578 - 2808747 | 40826.1 |
| glutamate-5-semialdehyde dehydrogenase | HRR99_13695 | Q8UBS1 | Positive | 2808740 - 2810026 | 44763.7 |
| nicotinate-nucleotide adenylyltransferase | HRR99_13700 | Q8UBS2 | Positive | 2810069 - 2810680 | 22537.2 |
| ribosome silencing factor | HRR99_13705 | Q5NLX3 | Positive | 2810739 - 2811182 | 16183.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | HRR99_13710 | Q8UBS4 | Positive | 2811286 - 2811768 | 17492.2 |
| murein hydrolase activator envc | HRR99_13715 | Q9JZ20 | Positive | 2811865 - 2813274 | 51427.0 |
| s41 family peptidase | HRR99_13720 | Q44879 | Positive | 2813264 - 2814592 | 47325.7 |
| divergent polysaccharide deacetylase family protein | HRR99_13725 | P44863 | Positive | 2814659 - 2815855 | 42164.2 |
| rna pyrophosphohydrolase | HRR99_13730 | Q8UBS8 | Positive | 2815893 - 2816399 | 19066.7 |
| bacterioferritin | HRR99_13735 | Q8FW95 | Negative | 2816454 - 2816945 | 18614.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

