Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate--coa ligase subunit alpha | HRR99_13540 | Q1RH56 | Negative | 2782584 - 2783486 | 31143.8 |
| adp-forming succinate--coa ligase subunit beta | HRR99_13545 | Q8UC60 | Negative | 2783504 - 2784697 | 41818.5 |
| malate dehydrogenase | HRR99_13550 | Q7CWK7 | Negative | 2784728 - 2785690 | 33597.0 |
| cell division protein zape | HRR99_13555 | Q32PX9 | Negative | 2785871 - 2787034 | 43104.0 |
| protease inhibitor inh/omp19 family protein | HRR99_13560 | Q8UC57 | Negative | 2787084 - 2787623 | 18305.5 |
| succinate dehydrogenase iron-sulfur subunit | HRR99_13565 | Q59662 | Negative | 2787828 - 2788607 | 29468.4 |
| succinate dehydrogenase flavoprotein subunit | HRR99_13570 | Q59661 | Negative | 2788625 - 2790469 | 66901.3 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | HRR99_13575 | Q1RHB6 | Negative | 2790476 - 2790856 | 13783.6 |
| succinate dehydrogenase, cytochrome b556 subunit | HRR99_13580 | Q59659 | Negative | 2790869 - 2791261 | 14551.1 |
| methyltransferase | HRR99_13585 | Q4V7W8 | Negative | 2791918 - 2792562 | 23354.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

