Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | HRR99_13440 | Q9I3S1 | Positive | 2754775 - 2756532 | 63404.8 |
| ofa family mfs transporter | HRR99_13445 | A0LNN5 | Negative | 2756602 - 2758257 | 58786.0 |
| cache domain-containing protein | HRR99_13450 | Q8X614 | Negative | 2758610 - 2760631 | 72872.7 |
| sigma-54-dependent fis family transcriptional regulator | HRR99_13455 | Q06065 | Negative | 2760624 - 2762009 | 51776.5 |
| formate dehydrogenase accessory sulfurtransferase fdhd | HRR99_13460 | Q8UC79 | Negative | 2762163 - 2762990 | 29361.3 |
| f0f1 atp synthase subunit epsilon | HRR99_13465 | Q8UC77 | Negative | 2763156 - 2763566 | 14845.7 |
| f0f1 atp synthase subunit beta | HRR99_13470 | Q8UC76 | Negative | 2763634 - 2765091 | 51435.8 |
| f0f1 atp synthase subunit gamma | HRR99_13475 | Q8UC75 | Negative | 2765116 - 2765994 | 31805.7 |
| f0f1 atp synthase subunit alpha | HRR99_13480 | Q8UC74 | Negative | 2766023 - 2767552 | 54777.8 |
| f0f1 atp synthase subunit delta | HRR99_13485 | Q7CWL8 | Negative | 2767552 - 2768118 | 19616.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

