Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like cysteine peptidase | HRR99_00755 | Not Available | Negative | 151721 - 152335 | 22873.3 |
| alpha/beta hydrolase | HRR99_00760 | Q5REX5 | Negative | 152433 - 153242 | 29486.2 |
| translation initiation factor if-3 | HRR99_00765 | B5ZXR7 | Positive | 153428 - 153964 | 20281.1 |
| 50s ribosomal protein l35 | HRR99_00770 | Q8UIN8 | Positive | 154156 - 154359 | 7287.23 |
| 50s ribosomal protein l20 | HRR99_00775 | Q8UIN7 | Positive | 154400 - 154804 | 15062.3 |
| serine/threonine protein phosphatase | HRR99_00780 | P44162 | Positive | 154926 - 155774 | 31346.2 |
| phenylalanine--trna ligase subunit alpha | HRR99_00785 | Q8UIN5 | Positive | 155796 - 156878 | 40422.2 |
| duf4160 domain-containing protein | HRR99_00790 | Not Available | Positive | 156882 - 157115 | 9010.63 |
| duf2442 domain-containing protein | HRR99_00795 | Not Available | Positive | 157099 - 157377 | 10247.0 |
| phenylalanine--trna ligase subunit beta | HRR99_00800 | Q8UIN4 | Positive | 157446 - 159869 | 86164.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

