Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | HRR99_13390 | Q3S8R0 | Negative | 2739602 - 2740828 | 45013.2 |
| phosphatase pap2 family protein | HRR99_13395 | Q1MA49 | Negative | 2740825 - 2741517 | 25488.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | HRR99_13400 | Q8UC86 | Positive | 2741745 - 2742941 | 42390.5 |
| metal-binding protein zint | HRR99_13405 | O05410 | Positive | 2743126 - 2743770 | 24146.0 |
| 5-aminolevulinate synthase | HRR99_13410 | P26505 | Negative | 2743843 - 2745060 | 44429.2 |
| glycine zipper 2tm domain-containing protein | HRR99_13415 | Not Available | Positive | 2745433 - 2745684 | 8227.96 |
| outer membrane protein assembly factor | HRR99_13420 | Q729H8 | Positive | 2745853 - 2747778 | 68006.8 |
| translocation/assembly module tamb | HRR99_13425 | Q57523 | Positive | 2747823 - 2751983 | 141187.0 |
| methyl-accepting chemotaxis protein | HRR99_13430 | Q9I3S1 | Positive | 2752254 - 2753969 | 61602.6 |
| purine-binding chemotaxis protein chew | HRR99_13435 | Q52881 | Positive | 2753969 - 2754445 | 17153.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

