Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa/acyl-acp dehydrogenase | HRR99_13290 | P63428 | Positive | 2713132 - 2714313 | 41910.3 |
| amino acid--[acyl-carrier-protein] ligase | HRR99_13295 | Q7CWR3 | Positive | 2714318 - 2715226 | 34005.6 |
| duf1839 family protein | HRR99_13300 | Not Available | Positive | 2715234 - 2716220 | 37154.0 |
| glycoside hydrolase family 2 protein | HRR99_13305 | Q0CCA0 | Positive | 2716235 - 2718682 | 90231.5 |
| abc transporter atp-binding protein | HRR99_13310 | P71082 | Positive | 2718882 - 2721599 | 101820.0 |
| cyclic nucleotide-binding domain-containing protein | HRR99_13315 | P9WMH2 | Positive | 2721641 - 2722096 | 16579.2 |
| mbl fold metallo-hydrolase | HRR99_13320 | Q73LB4 | Positive | 2722289 - 2723149 | 32057.9 |
| adenylate/guanylate cyclase domain-containing protein | HRR99_13325 | P43524 | Positive | 2723300 - 2724958 | 60802.7 |
| hypothetical protein | HRR99_13330 | Not Available | Negative | 2724964 - 2725446 | 17415.8 |
| nucleotide sugar dehydrogenase | HRR99_13335 | G3XD94 | Negative | 2725463 - 2726824 | 49162.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

