Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | HRR99_13190 | P52477 | Positive | 2692225 - 2693433 | 43155.1 |
| efflux rnd transporter permease subunit | HRR99_13195 | P31224 | Positive | 2693478 - 2696567 | 110013.0 |
| efflux transporter outer membrane subunit | HRR99_13200 | P15727 | Positive | 2696712 - 2698163 | 50970.2 |
| elongation factor p | HRR99_13205 | P0A3B5 | Negative | 2698293 - 2698862 | 21038.2 |
| ef-p lysine aminoacylase genx | HRR99_13210 | B4EWY8 | Positive | 2699112 - 2700176 | 39384.6 |
| lysine-2,3-aminomutase-like protein | HRR99_13215 | E3PRJ8 | Positive | 2700173 - 2701225 | 38397.0 |
| hypothetical protein | HRR99_13220 | Not Available | Positive | 2701608 - 2701799 | 7143.57 |
| lrp/asnc ligand binding domain-containing protein | HRR99_13225 | Q9V0Y9 | Negative | 2701921 - 2702157 | 8764.57 |
| fad-binding oxidoreductase | HRR99_13230 | P44732 | Positive | 2702398 - 2703681 | 46528.4 |
| histidine phosphatase family protein | HRR99_13235 | P9WIC6 | Positive | 2703869 - 2704522 | 24080.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

