Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | HRR99_12990 | Q0PEV3 | Negative | 2644638 - 2645432 | 28969.0 |
| hypothetical protein | HRR99_12995 | Not Available | Positive | 2645572 - 2645772 | 7424.6 |
| sigma-70 family rna polymerase sigma factor | HRR99_13000 | B3Q6P8 | Positive | 2645772 - 2646329 | 20753.7 |
| lrp/asnc ligand binding domain-containing protein | HRR99_13005 | Q44333 | Negative | 2646386 - 2646856 | 17578.5 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | HRR99_13010 | P95629 | Positive | 2647016 - 2650690 | 130673.0 |
| aldehyde dehydrogenase family protein | HRR99_13015 | P46562 | Negative | 2650737 - 2652272 | 53926.6 |
| lysr family transcriptional regulator | HRR99_13020 | P0A9F8 | Positive | 2652396 - 2653298 | 33649.5 |
| adenylate/guanylate cyclase domain-containing protein | HRR99_13025 | P40137 | Negative | 2653315 - 2654529 | 44957.6 |
| udp-glucose/gdp-mannose dehydrogenase family protein | HRR99_13030 | O54068 | Positive | 2654765 - 2656072 | 46581.9 |
| nad-dependent epimerase | HRR99_13035 | O54067 | Positive | 2656086 - 2657102 | 37604.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

