Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | HRR99_12940 | P0A3U6 | Negative | 2632578 - 2633687 | 41489.9 |
| glycoside hydrolase family 28 protein | HRR99_12945 | P27644 | Negative | 2633668 - 2635209 | 55201.3 |
| carbohydrate abc transporter substrate-binding protein | HRR99_12950 | O31518 | Negative | 2635220 - 2636491 | 45861.4 |
| abc transporter atp-binding protein | HRR99_12955 | P55604 | Negative | 2636531 - 2637640 | 40632.2 |
| carbohydrate abc transporter permease | HRR99_12960 | O31520 | Negative | 2637646 - 2638554 | 33798.7 |
| sugar abc transporter permease | HRR99_12965 | O31519 | Negative | 2638557 - 2639441 | 33420.3 |
| helix-turn-helix transcriptional regulator | HRR99_12970 | Not Available | Positive | 2639733 - 2640683 | 35486.6 |
| prc-barrel domain-containing protein | HRR99_12975 | Not Available | Negative | 2640780 - 2641337 | 18104.2 |
| histidine kinase | HRR99_12980 | B2SB67 | Positive | 2641586 - 2643289 | 62210.8 |
| sensor histidine kinase | HRR99_12985 | Q2YKK7 | Negative | 2643533 - 2644525 | 36973.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

