Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter permease subunit cysw | HRR99_12890 | P0AEB1 | Negative | 2623303 - 2624184 | 31069.7 |
| sulfate abc transporter permease subunit cyst | HRR99_12895 | P16701 | Negative | 2624188 - 2625009 | 29224.4 |
| thiosulfate abc transporter substrate-binding protein cysp | HRR99_12900 | P16700 | Negative | 2625084 - 2626070 | 36331.7 |
| enoyl-coa hydratase/isomerase family protein | HRR99_12905 | Q5XIE6 | Negative | 2626216 - 2627289 | 39164.9 |
| duf2934 domain-containing protein | HRR99_12910 | Not Available | Positive | 2627567 - 2627803 | 8912.38 |
| saccharopine dehydrogenase family protein | HRR99_12915 | P0DPE4 | Negative | 2627896 - 2629134 | 45317.2 |
| carboxynorspermidine decarboxylase | HRR99_12920 | Q5QCP2 | Negative | 2629227 - 2630324 | 41229.9 |
| duf883 family protein | HRR99_12925 | Not Available | Positive | 2630676 - 2631017 | 11850.0 |
| hypothetical protein | HRR99_12930 | Not Available | Positive | 2631027 - 2631446 | 14778.1 |
| udp-glucose 4-epimerase gale | HRR99_12935 | P26503 | Positive | 2631574 - 2632557 | 36454.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

