Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | HRR99_12840 | Q2YKX3 | Negative | 2613199 - 2614224 | 36291.2 |
| abc transporter permease | HRR99_12845 | P0AFL2 | Negative | 2614217 - 2614996 | 27854.1 |
| abc transporter permease | HRR99_12850 | P45170 | Negative | 2614993 - 2615820 | 29773.7 |
| abc transporter substrate-binding protein | HRR99_12855 | P0A2C8 | Negative | 2616093 - 2617115 | 37121.5 |
| laci family dna-binding transcriptional regulator | HRR99_12860 | P37947 | Negative | 2617112 - 2618179 | 36808.9 |
| lysr family transcriptional regulator | HRR99_12865 | P0A9F8 | Negative | 2618297 - 2619211 | 32949.0 |
| acyl-coa dehydrogenase | HRR99_12870 | Q92947 | Positive | 2619307 - 2620494 | 43590.3 |
| hypothetical protein | HRR99_12875 | Not Available | Negative | 2620479 - 2620649 | 6116.37 |
| nad-dependent succinate-semialdehyde dehydrogenase | HRR99_12880 | Q1JUP4 | Positive | 2620781 - 2622217 | 51475.8 |
| sulfate/molybdate abc transporter atp-binding protein | HRR99_12885 | Q8UA73 | Negative | 2622278 - 2623306 | 37928.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

