Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | HRR99_12690 | P55534 | Negative | 2582304 - 2582594 | 11064.5 |
| ribbon-helix-helix protein, copg family | HRR99_12695 | P55533 | Negative | 2582601 - 2582837 | 8691.97 |
| methylated-dna--[protein]-cysteine s-methyltransferase | HRR99_12700 | P06134 | Negative | 2582906 - 2583778 | 31721.0 |
| duf2244 domain-containing protein | HRR99_12705 | Not Available | Negative | 2583850 - 2584332 | 18134.1 |
| endonuclease iii | HRR99_12710 | Q92GH4 | Positive | 2584389 - 2585159 | 28599.1 |
| sulfate transporter family protein | HRR99_12715 | B7LCF8 | Negative | 2585133 - 2585858 | 26251.9 |
| murr/rpir family transcriptional regulator | HRR99_12720 | P46117 | Positive | 2586171 - 2586992 | 30528.0 |
| fggy-family carbohydrate kinase | HRR99_12725 | Q96C11 | Negative | 2587065 - 2588636 | 55490.0 |
| had family hydrolase | HRR99_12730 | P31467 | Negative | 2588815 - 2589486 | 24489.4 |
| mannitol dehydrogenase family protein | HRR99_12735 | P33216 | Negative | 2589503 - 2590984 | 54107.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

