Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter substrate-binding protein | HRR99_12640 | Q56952 | Positive | 2573168 - 2574058 | 32133.3 |
| manganese/iron abc transporter atp-binding protein | HRR99_12645 | P44662 | Positive | 2574061 - 2574945 | 32128.7 |
| metal abc transporter permease | HRR99_12650 | Q56954 | Positive | 2574938 - 2575798 | 30285.8 |
| metal abc transporter permease | HRR99_12655 | Q56955 | Positive | 2575795 - 2576646 | 29944.2 |
| duf1328 domain-containing protein | HRR99_12660 | Q8U7I2 | Positive | 2576775 - 2576948 | 6060.98 |
| is4 family transposase | HRR99_12665 | P55729 | Negative | 2577057 - 2578223 | 43549.3 |
| sdr family oxidoreductase | HRR99_12670 | Q3KPT7 | Negative | 2578424 - 2579155 | 25641.5 |
| iclr family transcriptional regulator | HRR99_12675 | P77732 | Positive | 2579299 - 2580063 | 27764.2 |
| transaldolase | HRR99_12680 | Q8U7I5 | Negative | 2580156 - 2581112 | 34410.2 |
| sugar-binding transcriptional regulator | HRR99_12685 | Q2YIQ4 | Positive | 2581313 - 2582290 | 35234.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

