Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tellurite resistance terb family protein | HRR99_12590 | P33218 | Positive | 2560176 - 2560877 | 24547.3 |
| laci family dna-binding transcriptional regulator | HRR99_12595 | P37947 | Positive | 2561310 - 2562329 | 36254.4 |
| xylulokinase | HRR99_12600 | P09099 | Positive | 2562354 - 2563808 | 50774.9 |
| xylose isomerase | HRR99_12605 | Q8U7G6 | Positive | 2564057 - 2565367 | 49053.7 |
| nad(p)h-dependent oxidoreductase | HRR99_12610 | Q4L920 | Positive | 2565936 - 2566568 | 23937.3 |
| methionine abc transporter atp-binding protein | HRR99_12615 | Q8U7G2 | Positive | 2566878 - 2567918 | 36413.9 |
| abc transporter permease | HRR99_12620 | Q9KTJ6 | Positive | 2567908 - 2568576 | 23145.4 |
| metq/nlpa family abc transporter substrate-binding protein | HRR99_12625 | Q8ZRN1 | Positive | 2568601 - 2569377 | 27702.1 |
| bifunctional diguanylate cyclase/phosphodiesterase | HRR99_12630 | P55552 | Positive | 2569580 - 2571772 | 79608.8 |
| hypothetical protein | HRR99_12635 | Not Available | Negative | 2571884 - 2572846 | 33038.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

