Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terc family protein | HRR99_12540 | P0AEC2 | Positive | 2548872 - 2549621 | 27126.2 |
| hypothetical protein | HRR99_12545 | Not Available | Positive | 2549715 - 2550128 | 15213.1 |
| slc13 family permease | HRR99_12550 | P72958 | Positive | 2550251 - 2552020 | 62286.6 |
| glutamate--trna ligase | HRR99_12555 | Q8U7H5 | Positive | 2552216 - 2553673 | 54186.1 |
| lysine--trna ligase | HRR99_12560 | Q8U7H6 | Positive | 2553909 - 2555408 | 56728.6 |
| is481 family transposase | HRR99_12565 | P37007 | Positive | 2555665 - 2556786 | 43296.9 |
| rhodanese-related sulfurtransferase | HRR99_12570 | Q8U7F8 | Negative | 2556862 - 2557806 | 35418.2 |
| chad domain-containing protein | HRR99_12575 | Not Available | Negative | 2557909 - 2558817 | 34090.5 |
| cyth domain-containing protein | HRR99_12580 | A3DIJ8 | Negative | 2558801 - 2559289 | 18366.5 |
| 2-dehydro-3-deoxy-phosphogluconate aldolase | HRR99_12585 | P0A957 | Positive | 2559441 - 2560079 | 21687.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

