Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | HRR99_12490 | P72131 | Positive | 2540069 - 2540962 | 33396.8 |
| duf1007 family protein | HRR99_12495 | P22041 | Positive | 2541057 - 2541704 | 23991.6 |
| nickel/cobalt transporter | HRR99_12500 | P44136 | Positive | 2541887 - 2542906 | 35248.6 |
| hypothetical protein | HRR99_12505 | Not Available | Positive | 2542979 - 2543518 | 19734.4 |
| hypothetical protein | HRR99_12510 | Not Available | Positive | 2543518 - 2544054 | 18991.5 |
| hypothetical protein | HRR99_12515 | Not Available | Negative | 2544062 - 2544271 | 7749.66 |
| gnat family n-acetyltransferase | HRR99_12520 | P40586 | Negative | 2544268 - 2544951 | 25653.4 |
| dha2 family efflux mfs transporter permease subunit | HRR99_12525 | P0DPR7 | Negative | 2545095 - 2546678 | 57141.6 |
| hlyd family efflux transporter periplasmic adaptor subunit | HRR99_12530 | P0DPR6 | Negative | 2546700 - 2547893 | 42105.8 |
| tetr/acrr family transcriptional regulator | HRR99_12535 | P43506 | Positive | 2548046 - 2548717 | 24853.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

