Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | HRR99_12390 | Not Available | Positive | 2517727 - 2518623 | 32783.9 |
| copper resistance protein | HRR99_12395 | Not Available | Positive | 2518692 - 2519117 | 15060.4 |
| abc transporter atp-binding protein | HRR99_12400 | Q57180 | Negative | 2519183 - 2521345 | 78803.5 |
| aa3-type cytochrome c oxidase subunit iv | HRR99_12405 | Not Available | Negative | 2521527 - 2521751 | 8043.07 |
| trap transporter small permease subunit | HRR99_12410 | Q9KQS0 | Positive | 2522176 - 2522715 | 20179.1 |
| trap transporter large permease subunit | HRR99_12415 | Q9HU16 | Positive | 2522745 - 2524247 | 53493.7 |
| trap transporter substrate-binding protein | HRR99_12420 | Q3J1R2 | Negative | 2524628 - 2525734 | 40379.2 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | HRR99_12425 | P76038 | Positive | 2526024 - 2526779 | 26977.9 |
| hamp domain-containing protein | HRR99_12430 | P55439 | Negative | 2526797 - 2528593 | 64768.8 |
| ompw family protein | HRR99_12435 | P55561 | Positive | 2529017 - 2529703 | 24509.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

