Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | HRR99_12340 | O07576 | Positive | 2507883 - 2509283 | 48785.8 |
| is5 family transposase | HRR99_12345 | Q08082 | Negative | 2509267 - 2510021 | 28669.8 |
| hypothetical protein | HRR99_12350 | Not Available | Negative | 2510098 - 2510625 | 20431.8 |
| lyse family translocator | HRR99_12355 | A8AHJ0 | Positive | 2510952 - 2511584 | 22140.5 |
| sarcosine oxidase subunit gamma | HRR99_12360 | Q46338 | Negative | 2511608 - 2512150 | 19035.4 |
| sarcosine oxidase subunit alpha | HRR99_12365 | O87386 | Negative | 2512143 - 2515100 | 106559.0 |
| sarcosine oxidase subunit delta | HRR99_12370 | Q46336 | Negative | 2515097 - 2515411 | 12089.2 |
| hypothetical protein | HRR99_12375 | Not Available | Negative | 2515421 - 2515765 | 12806.7 |
| sarcosine oxidase subunit beta family protein | HRR99_12380 | Q52671 | Negative | 2515825 - 2517078 | 45477.2 |
| 30s ribosomal protein s21 | HRR99_12385 | Q8U8M6 | Positive | 2517383 - 2517616 | 9151.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

