Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circularly permuted type 2 atp-grasp protein | HRR99_12290 | P9WL97 | Positive | 2490972 - 2493362 | 88869.0 |
| transglutaminase family protein | HRR99_12295 | P9WL92 | Positive | 2493366 - 2494247 | 32071.5 |
| tade/tadg family protein | HRR99_12300 | Not Available | Positive | 2494437 - 2495669 | 43861.8 |
| glycogen/starch/alpha-glucan phosphorylase | HRR99_12305 | P45180 | Positive | 2495897 - 2498359 | 92432.5 |
| 1,4-alpha-glucan branching protein glgb | HRR99_12310 | Q8U8L4 | Positive | 2498359 - 2500566 | 83499.7 |
| glucose-1-phosphate adenylyltransferase | HRR99_12315 | Q8U8L5 | Positive | 2500636 - 2501898 | 46953.8 |
| glycogen synthase glga | HRR99_12320 | P0A3F2 | Positive | 2501904 - 2503346 | 51682.8 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | HRR99_12325 | P39671 | Positive | 2503347 - 2504978 | 57818.4 |
| glycogen debranching protein glgx | HRR99_12330 | A4WFL4 | Positive | 2505197 - 2507146 | 71678.1 |
| maoc family dehydratase | HRR99_12335 | P08634 | Positive | 2507236 - 2507724 | 17939.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

