Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | HRR99_12190 | P25852 | Negative | 2466948 - 2468510 | 56820.4 |
| m3 family oligoendopeptidase | HRR99_12195 | O31605 | Positive | 2468681 - 2470525 | 68512.0 |
| aminotransferase class iv | HRR99_12200 | P74921 | Positive | 2470612 - 2471247 | 23412.1 |
| is110 family transposase | HRR99_12205 | P19257 | Negative | 2471464 - 2472393 | 33695.3 |
| diguanylate cyclase | HRR99_12210 | Q9HT84 | Negative | 2472623 - 2473531 | 34419.1 |
| homospermidine synthase | HRR99_12215 | Q98H64 | Positive | 2473775 - 2475223 | 54150.3 |
| hypothetical protein | HRR99_12220 | Q8U9F9 | Positive | 2475382 - 2475753 | 12921.3 |
| 5'-nucleotidase c-terminal domain-containing protein | HRR99_12225 | B6EWW8 | Positive | 2475959 - 2477908 | 68340.9 |
| ferrochelatase | HRR99_12230 | Q8U9F7 | Positive | 2478373 - 2479422 | 40044.0 |
| spfh/band 7/phb domain protein | HRR99_12235 | P0AA55 | Positive | 2479466 - 2480530 | 38336.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

