Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic murein transglycosylase | HRR99_12090 | P41052 | Positive | 2442229 - 2443464 | 45442.5 |
| duf459 domain-containing protein | HRR99_12095 | Not Available | Positive | 2443640 - 2444755 | 41269.5 |
| gnat family n-acetyltransferase | HRR99_12100 | P21340 | Positive | 2444944 - 2445486 | 19939.1 |
| hypothetical protein | HRR99_12105 | Not Available | Negative | 2445526 - 2445768 | 8680.66 |
| glutamate synthase subunit beta | HRR99_12110 | P9WN18 | Negative | 2445901 - 2447358 | 52849.9 |
| type ii toxin-antitoxin system vapc family toxin | HRR99_12115 | Q4UNB2 | Negative | 2447379 - 2447777 | 14843.9 |
| abrb/maze/spovt family dna-binding domain-containing protein | HRR99_12120 | E4QWH3 | Negative | 2447774 - 2448040 | 10044.9 |
| glutamate synthase large subunit | HRR99_12125 | P55037 | Negative | 2448097 - 2452836 | 173134.0 |
| low specificity l-threonine aldolase | HRR99_12130 | O50584 | Positive | 2453193 - 2454248 | 38298.6 |
| lysr family transcriptional regulator | HRR99_12135 | P52662 | Negative | 2454459 - 2455319 | 31271.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

