Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i glyceraldehyde-3-phosphate dehydrogenase | HRR99_11940 | P51009 | Positive | 2414860 - 2415870 | 35943.2 |
| higa family addiction module antidote protein | HRR99_11945 | P37371 | Negative | 2415951 - 2416283 | 11819.4 |
| type ii toxin-antitoxin system rele/pare family toxin | HRR99_11950 | Q7A225 | Negative | 2416293 - 2416583 | 11317.6 |
| potassium/proton antiporter | HRR99_11955 | Q0ZAH6 | Positive | 2416908 - 2418782 | 67066.1 |
| phosphoglycerate kinase | HRR99_11960 | Q8U9I9 | Positive | 2418857 - 2420059 | 41881.4 |
| putative addiction module antidote protein | HRR99_11965 | P44191 | Negative | 2420073 - 2420363 | 10245.3 |
| type ii toxin-antitoxin system rele/pare family toxin | HRR99_11970 | P44190 | Negative | 2420356 - 2420661 | 11296.7 |
| fructose-bisphosphate aldolase class i | HRR99_11975 | Q8PHB5 | Positive | 2420854 - 2421879 | 36826.9 |
| fad-binding dehydrogenase | HRR99_11980 | Q7D9A2 | Positive | 2422052 - 2423698 | 59272.8 |
| atp-binding cassette domain-containing protein | HRR99_11985 | Q0WML0 | Negative | 2423695 - 2425503 | 64061.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

