Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate phosphoribosyltransferase | HRR99_00605 | Q8UIS9 | Positive | 119648 - 120952 | 49901.8 |
| leucyl aminopeptidase family protein | HRR99_00610 | Q823J9 | Negative | 120983 - 122380 | 50089.3 |
| tetratricopeptide repeat protein | HRR99_00615 | P58937 | Positive | 122525 - 123346 | 29844.3 |
| type ii secretion system f family protein | HRR99_00620 | Not Available | Negative | 123410 - 124396 | 36576.0 |
| type ii secretion system f family protein | HRR99_00625 | Not Available | Negative | 124409 - 125413 | 36940.1 |
| cpaf family protein | HRR99_00630 | P9WMT2 | Negative | 125438 - 126904 | 53593.3 |
| ctpf protein | HRR99_00635 | Not Available | Negative | 126945 - 128234 | 47206.8 |
| cpad family pilus assembly protein | HRR99_00640 | Not Available | Negative | 128271 - 128951 | 23875.4 |
| type ii and iii secretion system protein family protein | HRR99_00645 | P55702 | Negative | 128966 - 130552 | 56598.2 |
| flp pilus assembly protein cpab | HRR99_00650 | Not Available | Negative | 130549 - 131358 | 28105.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

