Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | HRR99_11890 | Q8U9K1 | Negative | 2406088 - 2406834 | 26722.3 |
| pyridoxamine 5'-phosphate oxidase family protein | HRR99_11895 | Not Available | Positive | 2407033 - 2407536 | 18754.0 |
| mbl fold metallo-hydrolase | HRR99_11900 | Not Available | Negative | 2407560 - 2408411 | 30892.6 |
| tigr00282 family metallophosphoesterase | HRR99_11905 | O31775 | Negative | 2408579 - 2409403 | 29438.0 |
| 5-formyltetrahydrofolate cyclo-ligase | HRR99_11910 | A0R3H2 | Negative | 2409400 - 2409993 | 21192.8 |
| hlyc/corc family transporter | HRR99_11915 | P74409 | Negative | 2409993 - 2411255 | 45248.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2411514 - 2411672 | Not Available |
| cell division protein zapa | HRR99_11925 | Not Available | Negative | 2411833 - 2412210 | 13663.5 |
| duf4164 domain-containing protein | HRR99_11930 | Not Available | Negative | 2412223 - 2412495 | 10377.3 |
| transketolase | HRR99_11935 | P51010 | Positive | 2412820 - 2414802 | 71644.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

