Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein dinb | HRR99_11840 | Q02886 | Negative | 2399408 - 2399989 | 21945.0 |
| hva1 family protein | HRR99_11845 | Not Available | Negative | 2400047 - 2400265 | 8025.54 |
| metallophosphoesterase | HRR99_11850 | O34870 | Negative | 2400317 - 2401171 | 30808.1 |
| holliday junction branch migration dna helicase ruvb | HRR99_11855 | Q8U9K6 | Negative | 2401213 - 2402253 | 38233.4 |
| type ii toxin-antitoxin system vapc family toxin | HRR99_11860 | Not Available | Negative | 2402250 - 2402657 | 15135.1 |
| abrb/maze/spovt family dna-binding domain-containing protein | HRR99_11865 | Not Available | Negative | 2402654 - 2402932 | 10290.2 |
| holliday junction branch migration protein ruva | HRR99_11870 | Q8U9K5 | Negative | 2402987 - 2403604 | 21362.8 |
| crossover junction endodeoxyribonuclease ruvc | HRR99_11875 | B9JRI5 | Negative | 2403632 - 2404144 | 18143.2 |
| llm class flavin-dependent oxidoreductase | HRR99_11880 | P0ADV6 | Positive | 2404361 - 2405362 | 36334.6 |
| nucleoside monophosphate kinase | HRR99_11885 | Q3J7A3 | Negative | 2405391 - 2405966 | 20142.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

