Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | HRR99_11790 | Q8U9L7 | Negative | 2390634 - 2391941 | 46903.2 |
| tol-pal system protein ybgf | HRR99_11795 | Not Available | Negative | 2391965 - 2392972 | 35239.4 |
| peptidoglycan-associated lipoprotein pal | HRR99_11800 | Q8U9L5 | Negative | 2393129 - 2393665 | 18881.4 |
| tol-pal system protein tolb | HRR99_11805 | Q8U9L4 | Negative | 2393876 - 2395189 | 48153.1 |
| hypothetical protein | HRR99_11810 | Not Available | Negative | 2395270 - 2396454 | 41427.5 |
| protein tolr | HRR99_11815 | P50599 | Negative | 2396462 - 2396920 | 15649.0 |
| protein tolq | HRR99_11820 | P50598 | Negative | 2396951 - 2397670 | 25786.4 |
| tol-pal system-associated acyl-coa thioesterase | HRR99_11825 | P44679 | Negative | 2397931 - 2398371 | 16582.2 |
| nudix hydrolase | HRR99_11830 | C0SPC3 | Negative | 2398364 - 2398906 | 20783.7 |
| nudix hydrolase | HRR99_11835 | C0SPC3 | Negative | 2398903 - 2399415 | 20090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

