Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2376259 - 2376335 | Not Available |
| trna 2-thiouridine(34) synthase mnma | HRR99_11745 | Q8U9M5 | Negative | 2376470 - 2377666 | 43161.3 |
| opgc domain-containing protein | HRR99_11750 | Not Available | Negative | 2377827 - 2379014 | 44903.3 |
| tim44 domain-containing protein | HRR99_11755 | Not Available | Negative | 2379383 - 2380450 | 36981.8 |
| phosphoglycerate dehydrogenase | HRR99_11760 | P73821 | Negative | 2380655 - 2382250 | 56370.2 |
| phosphoserine transaminase | HRR99_11765 | Q8TNI1 | Negative | 2382326 - 2383504 | 42391.9 |
| porin family protein | HRR99_11770 | Q579D9 | Negative | 2383705 - 2384508 | 28620.8 |
| eal domain-containing protein | HRR99_11775 | Q9ABX9 | Positive | 2385060 - 2386916 | 68230.4 |
| phosphoglucosamine mutase | HRR99_11780 | Q8U9L9 | Negative | 2386964 - 2388316 | 48601.5 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | HRR99_11785 | A1URA3 | Negative | 2388532 - 2390478 | 70596.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

