Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HRR99_11640 | Not Available | Positive | 2354256 - 2354654 | 13674.5 |
| sensor histidine kinase | HRR99_11645 | Q9HV31 | Negative | 2354694 - 2356070 | 48767.6 |
| response regulator transcription factor | HRR99_11650 | Q9HV32 | Negative | 2356067 - 2356747 | 24578.6 |
| abc transporter substrate-binding protein | HRR99_11655 | Not Available | Positive | 2356832 - 2357899 | 39627.5 |
| tripartite tricarboxylate transporter substrate binding protein | HRR99_11660 | O34439 | Positive | 2358144 - 2359088 | 32489.0 |
| tripartite tricarboxylate transporter tctb family protein | HRR99_11665 | Not Available | Positive | 2359085 - 2359579 | 17951.2 |
| tripartite tricarboxylate transporter permease | HRR99_11670 | P70795 | Positive | 2359674 - 2361191 | 52504.3 |
| hypothetical protein | HRR99_11675 | Not Available | Positive | 2361319 - 2361576 | 9473.36 |
| dna starvation/stationary phase protection protein dps | HRR99_11680 | Q8UCK6 | Positive | 2361690 - 2362178 | 17897.1 |
| hypothetical protein | HRR99_11685 | Not Available | Positive | 2362238 - 2362510 | 9878.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

