Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HRR99_11540 | Not Available | Positive | 2336543 - 2338792 | 80512.8 |
| rna polymerase sigma factor rpoh | HRR99_11545 | P50507 | Negative | 2338903 - 2339805 | 34351.2 |
| class i sam-dependent methyltransferase | HRR99_11550 | Not Available | Negative | 2339985 - 2340767 | 29944.8 |
| rlua family pseudouridine synthase | HRR99_11555 | P50513 | Negative | 2341053 - 2342075 | 37439.6 |
| hypothetical protein | HRR99_11560 | Not Available | Positive | 2342115 - 2342495 | 13484.3 |
| rna methyltransferase | HRR99_11565 | P9WFY2 | Positive | 2342485 - 2343330 | 30007.1 |
| transglycosylase slt domain-containing protein | HRR99_11570 | Not Available | Positive | 2343432 - 2344016 | 22122.2 |
| alpha/beta hydrolase | HRR99_11575 | O34842 | Negative | 2344149 - 2344760 | 22244.4 |
| voc family protein | HRR99_11580 | P96693 | Negative | 2344816 - 2345757 | 34440.4 |
| duf2218 domain-containing protein | HRR99_11585 | A5F660 | Negative | 2345918 - 2346988 | 39154.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

