Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | HRR99_11440 | Not Available | Positive | 2318258 - 2318818 | 20562.2 |
| polysaccharide deacetylase family protein | HRR99_11445 | Q81EK9 | Negative | 2318802 - 2319518 | 26774.4 |
| branched-chain amino acid abc transporter substrate-binding protein | HRR99_11450 | Q8FYS6 | Negative | 2319661 - 2320779 | 38705.8 |
| hypothetical protein | HRR99_11455 | Not Available | Negative | 2320896 - 2321249 | 13685.8 |
| abc transporter atp-binding protein | HRR99_11460 | P21630 | Negative | 2321404 - 2322132 | 26392.4 |
| abc transporter atp-binding protein | HRR99_11465 | P0A194 | Negative | 2322132 - 2322995 | 31311.9 |
| high-affinity branched-chain amino acid abc transporter permease livm | HRR99_11470 | P21628 | Negative | 2322995 - 2324392 | 50722.4 |
| branched-chain amino acid abc transporter permease livh | HRR99_11475 | P21627 | Negative | 2324397 - 2325299 | 32326.8 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | HRR99_11480 | Q8Z153 | Positive | 2325658 - 2326431 | 27552.9 |
| duf2793 domain-containing protein | HRR99_11485 | Not Available | Positive | 2326521 - 2327561 | 35868.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

