Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | HRR99_11340 | Q9HT84 | Negative | 2297850 - 2298593 | 26905.6 |
| peroxiredoxin | HRR99_11345 | O69777 | Negative | 2299032 - 2299568 | 19948.7 |
| urease subunit alpha | HRR99_11350 | Q8UCT2 | Negative | 2299731 - 2301440 | 60996.2 |
| duf1311 domain-containing protein | HRR99_11355 | P42879 | Negative | 2301489 - 2301899 | 14683.2 |
| urease subunit beta | HRR99_11360 | B5ZMP3 | Negative | 2301926 - 2302231 | 10975.2 |
| duf1272 domain-containing protein | HRR99_11365 | P42878 | Negative | 2302250 - 2302507 | 9049.05 |
| urease subunit gamma | HRR99_11370 | B9JR86 | Negative | 2302519 - 2302821 | 11140.7 |
| urease accessory protein ured | HRR99_11375 | Q8U544 | Negative | 2302899 - 2303726 | 29926.3 |
| polyhydroxybutyrate depolymerase | HRR99_11380 | Q9Y871 | Negative | 2303657 - 2304820 | 40957.3 |
| urea abc transporter atp-binding subunit urte | HRR99_11385 | P21630 | Negative | 2305131 - 2305826 | 25207.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

