Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | HRR99_11090 | P25888 | Negative | 2240339 - 2241901 | 55890.0 |
| response regulator | HRR99_11095 | Q54YZ9 | Positive | 2242392 - 2246030 | 135629.0 |
| doxx family protein | HRR99_11100 | P44069 | Negative | 2246088 - 2246477 | 13965.4 |
| mfs transporter | HRR99_11105 | O31444 | Negative | 2246672 - 2247817 | 41330.2 |
| class ii glutamine amidotransferase | HRR99_11110 | P54004 | Negative | 2247901 - 2248698 | 29166.8 |
| l,d-transpeptidase | HRR99_11115 | P39176 | Negative | 2248764 - 2249384 | 22661.6 |
| circularly permuted type 2 atp-grasp protein | HRR99_11120 | Q55587 | Positive | 2249760 - 2251169 | 52755.3 |
| alpha-e domain-containing protein | HRR99_11125 | P9WL96 | Positive | 2251173 - 2252114 | 35572.3 |
| transglutaminase family protein | HRR99_11130 | Q49757 | Positive | 2252139 - 2252960 | 30104.7 |
| hypothetical protein | HRR99_11135 | Not Available | Positive | 2253795 - 2258042 | 140773.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

