Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase family protein | HRR99_11040 | Q58322 | Negative | 2233623 - 2234363 | 26901.1 |
| hydroxyisourate hydrolase | HRR99_11045 | Q92UG5 | Negative | 2234369 - 2234725 | 12984.5 |
| ureidoglycolate lyase | HRR99_11050 | B3PW72 | Negative | 2234722 - 2235222 | 18606.0 |
| duf86 domain-containing protein | HRR99_11055 | I3ZRF2 | Negative | 2235225 - 2235587 | 13878.5 |
| nucleotidyltransferase family protein | HRR99_11060 | Q57877 | Negative | 2235584 - 2235877 | 10638.9 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | HRR99_11065 | D4GPU8 | Negative | 2235948 - 2236445 | 17834.1 |
| allantoinase puue | HRR99_11070 | O13842 | Negative | 2236442 - 2237365 | 35088.4 |
| duf1045 domain-containing protein | HRR99_11075 | A6SU94 | Negative | 2237444 - 2238151 | 26135.3 |
| fad-binding oxidoreductase | HRR99_11080 | S5FMM4 | Negative | 2238255 - 2239448 | 41897.2 |
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | HRR99_11085 | Q1QZP3 | Positive | 2239447 - 2240175 | 27114.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

