Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase small subunit | HRR99_10990 | P10351 | Positive | 2218952 - 2220421 | 53564.4 |
| xanthine dehydrogenase molybdopterin binding subunit | HRR99_10995 | P47990 | Positive | 2220425 - 2222764 | 85611.6 |
| xanthine dehydrogenase accessory protein xdhc | HRR99_11000 | Q46808 | Positive | 2222977 - 2223834 | 30558.2 |
| lysr family transcriptional regulator | HRR99_11005 | P0A9F8 | Positive | 2224060 - 2224953 | 33202.9 |
| urate hydroxylase puud | HRR99_11010 | Not Available | Positive | 2225054 - 2226301 | 46792.2 |
| guanine deaminase | HRR99_11015 | P76641 | Positive | 2226298 - 2227605 | 48338.1 |
| hamp domain-containing protein | HRR99_11020 | P55652 | Positive | 2227845 - 2229803 | 69209.8 |
| sulfite exporter taue/safe family protein | HRR99_11025 | Not Available | Negative | 2229864 - 2230607 | 26084.2 |
| alpha-hydroxy-acid oxidizing protein | HRR99_11030 | A4XYG7 | Positive | 2230828 - 2231964 | 41679.6 |
| d-alanyl-d-alanine carboxypeptidase | HRR99_11035 | P0AEB4 | Positive | 2232363 - 2233610 | 44555.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

