Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | HRR99_10940 | Q8UD28 | Negative | 2208512 - 2209951 | 53753.3 |
| tetratricopeptide repeat protein | HRR99_10945 | Not Available | Negative | 2209987 - 2210658 | 23780.8 |
| nnru family protein | HRR99_10950 | Not Available | Negative | 2210813 - 2211397 | 21563.5 |
| polysaccharide deacetylase family protein | HRR99_10955 | Not Available | Positive | 2211532 - 2212515 | 36614.1 |
| peptide antibiotic transporter sbma | HRR99_10960 | Q08120 | Negative | 2212569 - 2213840 | 48714.3 |
| type i methionyl aminopeptidase | HRR99_10965 | Q8CRU9 | Negative | 2214027 - 2214779 | 27182.4 |
| llm class flavin-dependent oxidoreductase | HRR99_10970 | Q53218 | Negative | 2214799 - 2215854 | 38605.2 |
| srpbcc family protein | HRR99_10975 | Not Available | Negative | 2215962 - 2216429 | 17637.8 |
| glycerol kinase glpk | HRR99_10980 | O86033 | Negative | 2216497 - 2217990 | 54460.1 |
| 3-hydroxybutyrate dehydrogenase | HRR99_10985 | O86034 | Positive | 2218152 - 2218928 | 27454.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

