Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix transcriptional regulator | HRR99_10890 | P28267 | Positive | 2197398 - 2197724 | 11462.8 |
| duf3095 domain-containing protein | HRR99_10895 | Not Available | Negative | 2197833 - 2199002 | 41821.0 |
| branched-chain amino acid abc transporter substrate-binding protein | HRR99_10900 | Q1MDE9 | Positive | 2199279 - 2200385 | 37861.0 |
| adenine deaminase | HRR99_10905 | Q7CXF0 | Positive | 2200519 - 2202228 | 61138.6 |
| hd-gyp domain-containing protein | HRR99_10910 | Q9HWS0 | Positive | 2202369 - 2203277 | 33521.4 |
| alpha glucosidase | HRR99_10915 | Q9Z3R8 | Negative | 2203282 - 2204949 | 62354.3 |
| sugar kinase | HRR99_10920 | P37647 | Positive | 2205114 - 2206031 | 32317.2 |
| glycosyltransferase family 1 protein | HRR99_10925 | P9WMY4 | Positive | 2206111 - 2207160 | 38413.8 |
| duf2026 family protein | HRR99_10930 | Not Available | Negative | 2207347 - 2207955 | 22115.2 |
| nudix domain-containing protein | HRR99_10935 | Q9X6X4 | Negative | 2208024 - 2208488 | 17388.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

