Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | HRR99_10840 | Q9JWA2 | Positive | 2186310 - 2188496 | 79861.2 |
| tigr00645 family protein | HRR99_10845 | Q9HVL0 | Positive | 2188708 - 2189229 | 19096.0 |
| luxr family transcriptional regulator | HRR99_10850 | Q89VI3 | Positive | 2189449 - 2190165 | 26635.6 |
| duf2333 family protein | HRR99_10855 | Not Available | Negative | 2190199 - 2191374 | 43707.5 |
| hypothetical protein | HRR99_10860 | Not Available | Negative | 2191494 - 2192516 | 37440.5 |
| pseudoazurin | HRR99_10865 | P19567 | Negative | 2192607 - 2193056 | 15758.5 |
| thymidine kinase | HRR99_10870 | Q7CXF9 | Negative | 2193179 - 2193760 | 21517.8 |
| choline abc transporter substrate-binding protein | HRR99_10875 | Q9L4K3 | Positive | 2193969 - 2194928 | 33872.3 |
| choline abc transporter permease subunit | HRR99_10880 | Q9RR45 | Positive | 2195016 - 2195867 | 30558.6 |
| choline abc transporter atp-binding protein | HRR99_10885 | P14175 | Positive | 2195864 - 2196910 | 37607.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

