Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | HRR99_10790 | A0A1C9CX66 | Positive | 2176623 - 2177684 | 39017.2 |
| atp-dependent clp protease proteolytic subunit | HRR99_10795 | Q8UD57 | Negative | 2177767 - 2178348 | 21314.6 |
| hupe/urej family protein | HRR99_10800 | P27650 | Positive | 2178568 - 2179158 | 19510.6 |
| duf2076 family protein | HRR99_10805 | Q89AS2 | Positive | 2179257 - 2180006 | 25636.8 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | HRR99_10810 | Q8UD54 | Negative | 2180026 - 2180490 | 16935.2 |
| cation transporter | HRR99_10815 | P74068 | Negative | 2180494 - 2181411 | 32239.4 |
| voc family protein | HRR99_10820 | Not Available | Negative | 2181537 - 2181932 | 15132.9 |
| tigr02117 family protein | HRR99_10825 | Not Available | Negative | 2181966 - 2182643 | 24143.3 |
| anthranilate synthase | HRR99_10830 | P15395 | Negative | 2182742 - 2184931 | 80497.8 |
| extensin family protein | HRR99_10835 | Not Available | Positive | 2185213 - 2186064 | 30737.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

