Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | HRR99_10740 | O34760 | Positive | 2167158 - 2168015 | 30535.6 |
| n-acetyltransferase | HRR99_10745 | P39368 | Negative | 2168106 - 2168669 | 20305.5 |
| glutathione s-transferase family protein | HRR99_10750 | P42620 | Positive | 2168962 - 2169954 | 37923.7 |
| nudix domain-containing protein | HRR99_10755 | P46351 | Negative | 2169956 - 2170387 | 16110.1 |
| metallophosphoesterase | HRR99_10760 | Not Available | Positive | 2170583 - 2171548 | 35344.2 |
| giy-yig nuclease family protein | HRR99_10765 | Q49UZ7 | Positive | 2171632 - 2171922 | 11298.7 |
| 2-isopropylmalate synthase | HRR99_10770 | Q8UD63 | Negative | 2172080 - 2173795 | 63390.3 |
| benzoate/h(+) symporter bene family transporter | HRR99_10775 | P76103 | Negative | 2174097 - 2175281 | 39924.2 |
| hypothetical protein | HRR99_10780 | Q82XD4 | Positive | 2175465 - 2176139 | 23957.7 |
| helix-turn-helix transcriptional regulator | HRR99_10785 | O27346 | Negative | 2176136 - 2176525 | 14642.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

