Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c1 | HRR99_10640 | P51131 | Negative | 2144304 - 2145191 | 32092.1 |
| cytochrome b n-terminal domain-containing protein | HRR99_10645 | P81378 | Negative | 2145214 - 2146497 | 48187.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | HRR99_10650 | Q02762 | Negative | 2146511 - 2147089 | 20417.2 |
| endonuclease/exonuclease/phosphatase family protein | HRR99_10655 | Not Available | Positive | 2147397 - 2148332 | 34281.8 |
| abc transporter atp-binding protein | HRR99_10660 | Q57180 | Negative | 2148337 - 2150205 | 69026.4 |
| abc transporter atp-binding protein | HRR99_10665 | Q57180 | Negative | 2150451 - 2152307 | 68465.8 |
| trna (cytidine(34)-2'-o)-methyltransferase | HRR99_10670 | B2IBT9 | Positive | 2152714 - 2153175 | 16889.3 |
| na/pi cotransporter family protein | HRR99_10675 | Q8X5Z7 | Positive | 2153365 - 2155017 | 58686.4 |
| hypothetical protein | HRR99_10680 | Not Available | Negative | 2155020 - 2155295 | 10561.5 |
| oxygen-dependent coproporphyrinogen oxidase | HRR99_10685 | Q8UD80 | Positive | 2155420 - 2156331 | 34635.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

