Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | HRR99_10590 | Q8UDA0 | Positive | 2135005 - 2135625 | 22509.9 |
| eal domain-containing protein | HRR99_10595 | Q9ABX9 | Positive | 2135942 - 2138326 | 87945.9 |
| transporter substrate-binding domain-containing protein | HRR99_10600 | Not Available | Positive | 2138352 - 2139068 | 26512.2 |
| aminoacyl-trna hydrolase | HRR99_10605 | Q8UD97 | Positive | 2139155 - 2139865 | 25687.2 |
| ycxb family protein | HRR99_10610 | Not Available | Positive | 2139960 - 2140484 | 20183.3 |
| exopolysaccharide biosynthesis protein | HRR99_10615 | P73633 | Positive | 2140636 - 2141250 | 21406.4 |
| redox-regulated atpase ychf | HRR99_10620 | Q9CP90 | Positive | 2141365 - 2142468 | 39756.6 |
| maoc family dehydratase | HRR99_10625 | P96670 | Positive | 2142625 - 2143083 | 16573.8 |
| maoc family dehydratase | HRR99_10630 | P96670 | Positive | 2143080 - 2143547 | 17492.7 |
| adenine phosphoribosyltransferase | HRR99_10635 | Q8UD91 | Negative | 2143584 - 2144126 | 19353.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

